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G:T/U MISMATCH-SPECIFIC DNA GLYCOSYLASE FROM E.COLI
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.6 12-20% PEG 400. 60-80MM AMMONIUM SULPHATE 0.05M SODIUM ACETATE PH 4.6
Crystal Properties Matthews coefficient Solvent content 2.5 49
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 40.01 α = 90 b = 49.05 β = 90 c = 91.08 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 1996-10-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.6 SRS PX9.6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 29 94.7 0.052 8.3 3.6 16296 15.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.9 85.6 0.11 6.2 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 1.8 10 15985 809 93.4 0.198 0.198 0.252 RANDOM 22.4
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 22.9 x_scangle_it 3.08 x_scbond_it 1.89 x_mcangle_it 1.74 x_angle_deg 1.5 x_improper_angle_d 1.37 x_mcbond_it 1.01 x_bond_d 0.01 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 22.9 x_scangle_it 3.08 x_scbond_it 1.89 x_mcangle_it 1.74 x_angle_deg 1.5 x_improper_angle_d 1.37 x_mcbond_it 1.01 x_bond_d 0.01 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1292 Nucleic Acid Atoms Solvent Atoms 158 Heterogen Atoms 10
Software Software Software Name Purpose CCP4 model building X-PLOR refinement MOSFLM data reduction CCP4 data scaling SCALA data scaling CCP4 phasing