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NMR solution structure of type-B lantibiotics mersacidin bound to lipid II in DPC micelles
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 2 mM mersacidin in 10 mM sodium phosphate buffer at pH 6.0, 2mM unlabeled lipid II, 100mM perdeuterated DPC 37% methanol/63% H2O 6.0 1 atm 293 2 2D TOCSY 2 mM mersacidin in 10 mM sodium phosphate buffer at pH 6.0, 2mM unlabeled lipid II, 100mM perdeuterated DPC 37% methanol/63% H2O 6.0 1 atm 293 3 DQF-COSY 2 mM mersacidin in 10 mM sodium phosphate buffer at pH 6.0, 2mM unlabeled lipid II, 100mM perdeuterated DPC 37% methanol/63% H2O 6.0 1 atm 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian UNITYPLUS 500 2 Bruker DRX 600 3 Bruker DRX 750
NMR Refinement Method Details Software SIMULATED ANNEALING TORSION, ANGLE DYNAMICS OPLS WATER REFINEMENT ARIA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 17
Computation: NMR Software # Classification Version Software Name Author 1 refinement ARIA 1.1 2 collection XwinNMR 3 processing NMRPipe 4 structure calculation CNS 1.1 5 structure calculation ARIA 1.1