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Thioesterase Domain of Picromycin Polyketide Synthase (PICS TE), pH 8.4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.4 298 30% PEG 4000, 100 mM Tris, 2 mM DTT, 100 mM lithium sulfate, pH 8.4,
VAPOR DIFFUSION, SITTING DROP at 298K
Crystal Properties Matthews coefficient Solvent content 2.83 56.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59.016 α = 90 b = 106.224 β = 90 c = 114.356 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 190 CCD ADSC QUANTUM 4 double crystals 2001-11-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 1.000 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 30 100 0.103 14.6 13.8 35346 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.2 2.24 100 0.648 2.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 30 35344 35344 1858 99.92 0.221 0.22115 0.21966 0.2451 0.24834 0.2647 RANDOM 18.323
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.83 -0.95 0.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 21.812 r_scangle_it 4.455 r_dihedral_angle_1_deg 3.881 r_scbond_it 2.829 p_angle_deg 1.741 p_angle_d 1.741 r_angle_refined_deg 1.741 r_mcangle_it 1.524 r_mcbond_it 0.845 r_nbd_refined 0.322
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 21.812 r_scangle_it 4.455 r_dihedral_angle_1_deg 3.881 r_scbond_it 2.829 p_angle_deg 1.741 p_angle_d 1.741 r_angle_refined_deg 1.741 r_mcangle_it 1.524 r_mcbond_it 0.845 r_nbd_refined 0.322 r_symmetry_vdw_refined 0.292 r_xyhbond_nbd_refined 0.289 r_symmetry_hbond_refined 0.214 r_chiral_restr 0.128 p_bond_d 0.017 r_bond_refined_d 0.017 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4183 Nucleic Acid Atoms Solvent Atoms 340 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling CNS refinement REFMAC refinement CNS phasing