X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 3ESTPDB ENTRY 3EST

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
15.5CRYSTALLIZED IN NA2SO4 SOLUTION, pH 5.5
Crystal Properties
Matthews coefficientSolvent content
2.1743.41

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 51.637α = 90
b = 57.973β = 90
c = 75.32γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray295'BLACK BOX' PROTOTYPE IMAGE PLATEJ.HENDRIX,A.LENTFERIR-COATED CYLINDRICAL MIR1995-07-14M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONLURE BEAMLINE DW21BLUREDW21B

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8730.492.90.0221214.217752314.75
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.871.9778.60.0563.93.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONSIRASFREE-RPDB ENTRY 3EST1.87101775217598880930.2060.1850.1870.22915.13
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor21.9
p_staggered_tor17.3
p_scangle_it5.27
p_scbond_it3.41
p_mcangle_it3.01
p_planar_tor2.9
p_mcbond_it2.31
p_multtor_nbd0.293
p_xyhbond_nbd0.216
p_chiral_restr0.19
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor21.9
p_staggered_tor17.3
p_scangle_it5.27
p_scbond_it3.41
p_mcangle_it3.01
p_planar_tor2.9
p_mcbond_it2.31
p_multtor_nbd0.293
p_xyhbond_nbd0.216
p_chiral_restr0.19
p_singtor_nbd0.183
p_angle_d0.053
p_planar_d0.051
p_bond_d0.02
p_plane_restr0.017
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1822
Nucleic Acid Atoms
Solvent Atoms79
Heterogen Atoms6

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
SHARPphasing
PROLSQrefinement
CCP4data scaling