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STRUCTURE OF Fs1, THE HEPARIN-BINDING DOMAIN OF FOLLISTATIN
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1LR7 PDB ENTRY 1LR7
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 289 30-35% PEG4000, 0.4 M Magnesium chloride, 0.1 M Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.35 43.68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 21.551 α = 90 b = 43.733 β = 90 c = 77.376 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 Mirrors 2001-02-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 0.9795 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 38.6 98.2 0.1 7.8 2787 33.26
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.5 2.59 90.4 0.171
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1LR7 2.5 38.63 2766 2766 126 98.26 0.22151 0.22151 0.21972 0.228 0.2579 0.2769 RANDOM 24.605
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.99 2.76 -0.77
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 20.408 r_scangle_it 4.759 r_scbond_it 2.805 r_dihedral_angle_1_deg 2.791 r_angle_refined_deg 1.698 r_mcangle_it 1.686 r_angle_other_deg 0.989 r_mcbond_it 0.867 r_xyhbond_nbd_refined 0.495 r_xyhbond_nbd_other 0.222
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 20.408 r_scangle_it 4.759 r_scbond_it 2.805 r_dihedral_angle_1_deg 2.791 r_angle_refined_deg 1.698 r_mcangle_it 1.686 r_angle_other_deg 0.989 r_mcbond_it 0.867 r_xyhbond_nbd_refined 0.495 r_xyhbond_nbd_other 0.222 r_nbd_other 0.214 r_nbd_refined 0.21 r_symmetry_vdw_other 0.137 r_symmetry_vdw_refined 0.096 r_chiral_restr 0.094 r_symmetry_hbond_refined 0.082 r_bond_refined_d 0.019 r_gen_planes_refined 0.008 r_gen_planes_other 0.004 r_bond_other_d 0.001 r_nbtor_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 527 Nucleic Acid Atoms Solvent Atoms 28 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement SCALEPACK data scaling CNS refinement DENZO data reduction CNS phasing