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Solution structure and characterization of the heme chaperone CcmE
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 2.0 mM apoCcmE, 20 mM phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O 20 mM phosphate 7.0 1 atm 298 2 2D TOCSY 2.0 mM apoCcmE, 20 mM phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O 20 mM phosphate 7.0 1 atm 298 3 3D_13C-separated_NOESY 2.0 mM apoCcmE, 20 mM phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O 20 mM phosphate 7.0 1 atm 298 4 3D_15N-separated_NOESY 2.0 mM apoCcmE, 20 mM phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O 20 mM phosphate 7.0 1 atm 298 5 HNHA 2.0 mM apoCcmE, 20 mM phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O 20 mM phosphate 7.0 1 atm 298 6 HNCO 2.0 mM apoCcmE, 20 mM phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O 20 mM phosphate 7.0 1 atm 298 7 HNHB 2.0 mM apoCcmE, 20 mM phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O 20 mM phosphate 7.0 1 atm 298 8 CBCANH 2.0 mM apoCcmE, 20 mM phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O 20 mM phosphate 7.0 1 atm 298 9 CC(CO)NH 2.0 mM apoCcmE, 20 mM phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O 20 mM phosphate 7.0 1 atm 298 10 CBCA(CO)NH 2.0 mM apoCcmE, 20 mM phosphate, 90% H2O, 10% D2O 90% H2O/10% D2O 20 mM phosphate 7.0 1 atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software simulated annealing, torsion angle dyanamics, restrained energy minimization 1866 meaningful NOEs and 89 dihedral angle constraints XwinNMR
NMR Ensemble Information Conformer Selection Criteria the submitted conformer models are the 35 structures with the lowest target function Conformers Calculated Total Number 400 Conformers Submitted Total Number 35 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details The structure was determined using triple-resonance NMR spectroscopy on 13C and 15N double labeled apoCcmE.
Computation: NMR Software # Classification Version Software Name Author 1 processing XwinNMR 2.6 Bruker 2 data analysis XEASY 1.3 Xia, Bartels 3 structure solution DYANA 1.5 Gunter, Mumenthaler, Wuthrich 4 iterative matrix relaxation CORMA Borgias, Thomas, James 5 refinement Amber 5.0 Pearlman, Case, Caldwell, Ross, Cheatham, Ferguson, Seibel, Singh, Weiner, Kollman