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Crystal Structure Analysis of HCA II Mutant T199P in Complex with Bicarbonate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.8 298 PEG 2000 or 3350, Tris-HCl, BME. Crystals are soaked in BME-free solution in the presence of bicarbonate, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.13 42.17
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.012 α = 90 b = 44.589 β = 92.82 c = 76.636 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE MAC Science DIP-2030H MIRRORS 1998-02-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 20 88.6 0.089 16497 16497
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.9 1.97 87.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 20 16497 16497 894 88.65 0.18909 0.18909 0.18771 0.2141 RANDOM 18.463
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.27 -0.54 0.7 -0.49
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 19.336 r_dihedral_angle_1_deg 3.938 r_scangle_it 3.569 r_scbond_it 2.188 r_mcangle_it 1.464 r_angle_refined_deg 1.443 r_mcbond_it 0.786 r_symmetry_vdw_refined 0.259 r_nbd_refined 0.233 r_xyhbond_nbd_refined 0.15
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 19.336 r_dihedral_angle_1_deg 3.938 r_scangle_it 3.569 r_scbond_it 2.188 r_mcangle_it 1.464 r_angle_refined_deg 1.443 r_mcbond_it 0.786 r_symmetry_vdw_refined 0.259 r_nbd_refined 0.233 r_xyhbond_nbd_refined 0.15 r_symmetry_hbond_refined 0.15 r_chiral_restr 0.108 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2049 Nucleic Acid Atoms Solvent Atoms 161 Heterogen Atoms 5
Software Software Software Name Purpose X-PLOR model building REFMAC refinement DENZO data reduction SCALEPACK data scaling X-PLOR phasing