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Crystal Structure Analysis of HCA II Mutant T199P in Complex with Thiocyanate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.8 293 PEG 2000 or 3350, Tris-HCl, BME. Crystals soaked in BME free solution with SCN., pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.25 45.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.516 α = 90 b = 51.315 β = 107.57 c = 81.003 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE MAC Science DIP-2030H 1998-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 20 91.9 0.113 11673 11673
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.2 2.28 92.9 0.255
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 20 11673 11673 609 91.96 0.201 0.201 0.197 0.252 RANDOM 22.234
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.11 -0.49 1.03 -1.22
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 19.843 r_dihedral_angle_1_deg 3.915 r_scangle_it 3.672 r_scbond_it 2.424 r_angle_refined_deg 1.709 r_mcangle_it 1.5 r_symmetry_hbond_refined 0.958 r_mcbond_it 0.848 r_nbd_refined 0.248 r_symmetry_vdw_refined 0.203
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 19.843 r_dihedral_angle_1_deg 3.915 r_scangle_it 3.672 r_scbond_it 2.424 r_angle_refined_deg 1.709 r_mcangle_it 1.5 r_symmetry_hbond_refined 0.958 r_mcbond_it 0.848 r_nbd_refined 0.248 r_symmetry_vdw_refined 0.203 r_xyhbond_nbd_refined 0.151 r_chiral_restr 0.106 r_bond_refined_d 0.017 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2049 Nucleic Acid Atoms Solvent Atoms 202 Heterogen Atoms 4
Software Software Software Name Purpose X-PLOR model building REFMAC refinement DENZO data reduction SCALEPACK data scaling X-PLOR phasing