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Crystal Structure Analysis of the HCA II Mutant T199P in complex with beta-mercaptoethanol
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.8 293 PEG 2000 or 3350, Tris-HCl, BME, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.13 42.19
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.84 α = 90 b = 44.803 β = 92.51 c = 76.457 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE MAC Science DIP-2030H 1997-12-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 20 93.1 0.066 22169 22169
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.75 1.81 94.5 0.36
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.75 20 2 23361 22169 1185 93.18 0.20648 0.20535 0.22735 RANDOM 25.472
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.15 -0.77 1.46 -0.37
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 17.207 r_dihedral_angle_1_deg 3.886 r_scangle_it 3.371 r_scbond_it 2.119 r_mcangle_it 1.507 r_angle_refined_deg 1.42 r_symmetry_hbond_refined 0.865 r_mcbond_it 0.824 r_nbd_refined 0.247 r_symmetry_vdw_refined 0.197
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 17.207 r_dihedral_angle_1_deg 3.886 r_scangle_it 3.371 r_scbond_it 2.119 r_mcangle_it 1.507 r_angle_refined_deg 1.42 r_symmetry_hbond_refined 0.865 r_mcbond_it 0.824 r_nbd_refined 0.247 r_symmetry_vdw_refined 0.197 r_xyhbond_nbd_refined 0.139 r_chiral_restr 0.101 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2049 Nucleic Acid Atoms Solvent Atoms 167 Heterogen Atoms 5
Software Software Software Name Purpose X-PLOR model building REFMAC refinement DENZO data reduction SCALEPACK data scaling X-PLOR phasing