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STRUCTURE OF A DICATIONIC MONOIMIDAZOLE LEXITROPSIN BOUND TO DNA (ORIENTATION 2)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 278 VAPOR DIFFUSION, SITTING DROP, temperature 278.00K
Crystal Properties Matthews coefficient Solvent content 2.04 39.85
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 24.03 α = 90 b = 39.26 β = 90 c = 66.3 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 248 DIFFRACTOMETER RIGAKU AFC-5R M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.25
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION 2.25 8 2 2322 86 0.164 0.235
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation n_sugar_angle_it 6.266 n_phos_angle_it 5.843 n_sugar_bond_it 5.48 n_phos_bond_it 5.343 n_chiral_restr 0.144 n_singtor_nbd 0.107 n_multtor_nbd 0.093 n_phos_bond_angle_d 0.069 n_sugar_bond_angle_d 0.049 n_phos_bond_d 0.03
RMS Deviations Key Refinement Restraint Deviation n_sugar_angle_it 6.266 n_phos_angle_it 5.843 n_sugar_bond_it 5.48 n_phos_bond_it 5.343 n_chiral_restr 0.144 n_singtor_nbd 0.107 n_multtor_nbd 0.093 n_phos_bond_angle_d 0.069 n_sugar_bond_angle_d 0.049 n_phos_bond_d 0.03 n_sugar_bond_d 0.025 n_plane_restr 0.015 n_bond_d n_angle_d n_planar_d n_hb_or_metal_coord n_bond_angle_restr n_dihedral_angle_restr n_impr_tor n_xhyhbond_nbd
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms Nucleic Acid Atoms 486 Solvent Atoms 37 Heterogen Atoms 31
Software Software Software Name Purpose NUCLSQ refinement