1LA8

Solution structure of the DNA hairpin 13-mer CGCGGTGTCCGCG


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1.8 mM DNA, 10 mM Sodium Phosphate, 100 mM NaCl, 50 uM EDTAD2O100 mM NaCl6.8ambient303
2DQF-COSY1.8 mM DNA, 10 mM Sodium Phosphate, 100 mM NaCl, 50 uM EDTAD2O100 mM NaCl6.8ambient303
331P-1H COSY1.8 mM DNA, 10 mM Sodium Phosphate, 100 mM NaCl, 50 uM EDTAD2O100 mM NaCl6.8ambient303
42D NOESY1.8 mM DNA, 1 mM Sodium Phosphate, 100 mM NaCl, 50 uM EDTAH2O/D2O100 mM NaCl6.8ambient278
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX500
NMR Refinement
MethodDetailsSoftware
Molecular Dynamics using a simulated annealing protocolUXNMR
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number1
Representative Model1 (minimized average structure)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionUXNMR3.0Bruker
2data analysisFelix97.0, 2000Hare, D.
3iterative matrix relaxationMARDIGRAS3.2Borgias & James
4refinementX-PLOR3.8Brunger