1L7Y
Solution NMR Structure of C. elegans Protein ZK652.3. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET WR41.
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 4D_13C-separated_NOESY | 0.9 mM 13C,15N-ZK652.3 10 mM ammonium acetate, 50 mM NaCl, 10 mM DTT, 99% D2O | 100% D2O | 10 mM ammonium acetate, 50 mM NaCl | 5.5 | ambient | 298 | |
2 | 3D_simultaneous_13C,15N-separated_NOESY | 0.9 mM 99%-13C,99%-15N-ZK652.3 10 mM ammonium acetate, 50 mM NaCl, 10 mM DTT, 5% D2O, pH 5.5 | 95% H2O/5% D2O | 10 mM ammonium acetate, 50 mM NaCl | 5.5 | ambient | 298 | |
3 | HNHA | 0.9 mM 99%-15N-ZK652.3 10 mM ammonium acetate, 50 mM NaCl, 10 mM DTT, 5% D2O, pH 5.5 | 95% H2O/5% D2O | 10 mM ammonium acetate, 50 mM NaCl | 5.5 | ambient | 298 | |
4 | 3D_15N-SEPARATED_NOESY | 0.9 mM 99%-13C,99%-15N-ZK652.3 10 mM ammonium acetate, 50 mM NaCl, 10 mM DTT, 5% D2O, pH 5.5 | 95% H2O/5% D2O | 10 mM ammonium acetate, 50 mM NaCl | 5.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 800 |
2 | Varian | INOVA | 600 |
3 | Varian | UNITY | 600 |
4 | Varian | INOVA | 750 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, simulated annealing | the X-PLOR routines dg_full_embed.inp, dgsa.inp, and refine_gentle.inp were used to produce the structural ensemble | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 26 |
Conformers Submitted Total Number | 24 |
Representative Model | 9 (closest to the average,fewest violations,lowest energy) |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1 | Varian, Inc. |
2 | processing | Felix | 98 | MSI |
3 | data analysis | Felix | 98 | MSI |
4 | structure solution | X-PLOR | 3.840 | A.T. Brunger |
5 | refinement | X-PLOR | 3.840 | A.T. Brunger |