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Solution Structure of Human GABA Receptor Associated Protein GABARAP
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-separated_NOESY 0.8mM GABARAP U-15N,13C;
25mM sodium oxalate, pH 6.9
100mM NaCl
100mM KCl
100uM PMSF
0.02% sodium azide
50uM EDTA
5% D2O, 95% H2O 95% H2O/5% D2O 100mM NaCl 100mM KCl 6.9 ambient 298 2 3D_13C-separated_NOESY 0.8mM GABARAP U-15N,13C;
25mM sodium oxalate, pH 6.9
100mM NaCl
100mM KCl
100uM PMSF
0.02% sodium azide
50uM EDTA
5% D2O, 95% H2O 95% H2O/5% D2O 100mM NaCl 100mM KCl 6.9 ambient 298 3 3D_13C-separated_NOESY 0.8mM GABARAP U-15N,13C;
25mM sodium phosphate, pH 6.9
100mM NaCl
100mM KCl
100uM PMSF
0.02% sodium azide
50uM EDTA
100% D2O 100% D2O 100mM NaCl 100mM KCl 6.9 ambient 298 4 3D_13C_-seperated(aromatics)_NOESY 0.8mM GABARAP U-15N,13C;
25mM sodium phosphate, pH 6.9
100mM NaCl
100mM KCl
100uM PMSF
0.02% sodium azide
50uM EDTA
100% D2O 100% D2O 100mM NaCl 100mM KCl 6.9 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 750 3 Bruker DMX 600
NMR Refinement Method Details Software simulated annealing VNMR
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 400 Conformers Submitted Total Number 15 Representative Model 2 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR 5.3 Varian 2 processing NMRPipe Delaglio 3 data analysis NMRView 5.0.3 Johnson 4 refinement ARIA 1.0 Nilges 5 refinement CNS 1.0 Brunger