1KOT

Solution Structure of Human GABA Receptor Associated Protein GABARAP


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY0.8mM GABARAP U-15N,13C; 25mM sodium oxalate, pH 6.9 100mM NaCl 100mM KCl 100uM PMSF 0.02% sodium azide 50uM EDTA 5% D2O, 95% H2O95% H2O/5% D2O100mM NaCl 100mM KCl6.9ambient298
23D_13C-separated_NOESY0.8mM GABARAP U-15N,13C; 25mM sodium oxalate, pH 6.9 100mM NaCl 100mM KCl 100uM PMSF 0.02% sodium azide 50uM EDTA 5% D2O, 95% H2O95% H2O/5% D2O100mM NaCl 100mM KCl6.9ambient298
33D_13C-separated_NOESY0.8mM GABARAP U-15N,13C; 25mM sodium phosphate, pH 6.9 100mM NaCl 100mM KCl 100uM PMSF 0.02% sodium azide 50uM EDTA 100% D2O100% D2O100mM NaCl 100mM KCl6.9ambient298
43D_13C_-seperated(aromatics)_NOESY0.8mM GABARAP U-15N,13C; 25mM sodium phosphate, pH 6.9 100mM NaCl 100mM KCl 100uM PMSF 0.02% sodium azide 50uM EDTA 100% D2O100% D2O100mM NaCl 100mM KCl6.9ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA750
3BrukerDMX600
NMR Refinement
MethodDetailsSoftware
simulated annealingVNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number400
Conformers Submitted Total Number15
Representative Model2 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR5.3Varian
2processingNMRPipeDelaglio
3data analysisNMRView5.0.3Johnson
4refinementARIA1.0Nilges
5refinementCNS1.0Brunger