1K8O
Solution Structure of the Lipoic Acid-Bearing Domain of the E2 component of Human, Mitochondrial Branched-Chain alpha-Ketoacid Dehydrogenase
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 2mM protein U-15N; 50mM phosphate buffer, pH7.5, 100mM NaCl, 0.02% (w/v) NaN3 | 90% H2O, 10% D2O or 100% D2O | 100mM NaCl | 7.5 | ambient | 310 | |
2 | HNHA | 2mM protein U-15N; 50mM phosphate buffer, pH7.5, 100mM NaCl, 0.02% (w/v) NaN3 | 90% H2O, 10% D2O or 100% D2O | 100mM NaCl | 7.5 | ambient | 310 | |
3 | 3D_13C-separated_NOESY | 2mM protein U-15N,13C; 50mM phosphate buffer, pH7.5, 100mM NaCl, 0.02% (w/v) NaN3 | 90% H2O, 10% D2O or 100% D2O | 100mM NaCl | 7.5 | ambient | 310 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | AMX | 500 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry simulated annealing molecular dynamics torsion angle dynamics | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structure with the lowest energy and acceptable covalent geometry |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.0 | Bruker |
2 | processing | XwinNMR | 2.0 | Bruker |
3 | data analysis | AURELIA | 2.0.6 | Bruker |
4 | refinement | ARIA | 1.0 | Nilges et al. |
5 | structure solution | ARIA | 1.0 | Nilges et al. |