☰ Navigation Tabs
TETRAGONAL CRYSTAL FORM OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 pH 7.00
Crystal Properties Matthews coefficient Solvent content 2.68 54.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 58.37 α = 90 b = 58.37 β = 90 c = 212.61 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2000-09-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 5ID-B APS 5ID-B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.5 20 96.5 0.072 5.4 8704 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.5 4 89.2 0.39
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 3.5 58.72 8255 903 95.53 0.27286 0.27174 0.2838 0.29679 0.3554 RANDOM 50.824
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 4.8 4.8 -9.61
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 21.397 r_scangle_it 4.715 r_dihedral_angle_1_deg 2.904 r_scbond_it 2.769 r_mcangle_it 2.164 r_angle_refined_deg 2.146 r_mcbond_it 1.166 r_nbd_refined 0.384 r_symmetry_vdw_refined 0.371 r_xyhbond_nbd_refined 0.275
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 21.397 r_scangle_it 4.715 r_dihedral_angle_1_deg 2.904 r_scbond_it 2.769 r_mcangle_it 2.164 r_angle_refined_deg 2.146 r_mcbond_it 1.166 r_nbd_refined 0.384 r_symmetry_vdw_refined 0.371 r_xyhbond_nbd_refined 0.275 r_symmetry_hbond_refined 0.247 r_chiral_restr 0.121 r_bond_refined_d 0.026 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4468 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose AMoRE phasing REFMAC refinement DENZO data reduction SCALEPACK data scaling