1JJG
Solution Structure of Myxoma Virus Protein M156R
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 1 mM M156R, U-15N, 13C; 25 mM phosphate buffer, pH 6.5 | 90% H2O/10% D2O | 450 mM NaCl, 25 mM Na2PO4 | 6.5 | ambient | 298 | |
2 | 4D_13C/15N-separated_NOESY | 1 mM M156R, U-15N, 13C; 25 mM phosphate buffer, pH 6.1 | 99% D2O, 1% H2O | 450 mM NaCl, 25 mM Na2PO4 | 6.5 | ambient | 298 | |
3 | HNHA | 1 mM M156R, U-15N; 25 mM phosphate buffer, pH 6.5 | 90% H2O/10% D2O | 450 mM NaCl, 25 mM Na2PO4 | 6.5 | ambient | 298 | |
4 | 2H_EXCHANGE | 450 mM NaCl, 25 mM Na2PO4 | 6.5 | ambient | 298 | |||
5 | NH_HSQC | 450 mM NaCl, 25 mM Na2PO4 | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 800 |
2 | Varian | INOVA | 750 |
3 | Varian | INOVA | 600 |
4 | Varian | INOVA | 500 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry and simulated annealing | 326 NOE-derived restraints, 66 dihedral angle restraints, 48 distance restraints from hydrogen bonds. | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | all calculated structures submitted |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR | 3.84 | Brunger |
2 | processing | Felix | 98 | MSI |
3 | collection | VNMR | Varian | |
4 | data analysis | Sparky | 3.1 | Goddard, Kneller |
5 | refinement | X-PLOR | 3.84 | Brunger |