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Crystal structure of transcriptional regulator (TM1602) from Thermotoga maritima at 2.3 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 293 0.8 M NaH2PO4/0.8 M KH2PO4, 0.1 M HEPES pH 7.5, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 293K, pH 7.50
Crystal Properties Matthews coefficient Solvent content 3.2 61.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 90.9566 α = 90 b = 90.9566 β = 90 c = 90.9566 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2002-04-08 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 0.91162, 0.979105, 0.979445 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 40.677 99.9 0.095 18.6 9.1 11360 39.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.42 99.9 0.324 3.7 3.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.3 40 2 11409 11136 574 99.9 0.19 0.19 0.1955 0.234 0.2389 RANDOM 28.5
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 3.98 c_scbond_it 2.71 c_mcangle_it 2.208 c_angle_deg 1.47 c_mcbond_it 1.36 c_bond_d 0.011 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 3.98 c_scbond_it 2.71 c_mcangle_it 2.208 c_angle_deg 1.47 c_mcbond_it 1.36 c_bond_d 0.011 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1347 Nucleic Acid Atoms Solvent Atoms 97 Heterogen Atoms 2
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling CCP4 data reduction SOLVE phasing RESOLVE model building CNS refinement CCP4 data scaling RESOLVE phasing