☰ Navigation Tabs
Solution Structure of Reduced Recombinant Human Cytochrome c
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 2mM Cytochrome c; 25mM phosphate buffer 90% H2O/10% D2O 125 6.5 ambient 300 2 2D TOCSY 2mM Cytochrome c; 25mM phosphate buffer 90% H2O/10% D2O 125 6.5 ambient 300 3 DQF-COSY 2mM Cytochrome c; 25mM phosphate buffer 90% H2O/10% D2O 125 6.5 ambient 300 4 2D NOESY 2mM Cytochrome c; 25mM phosphate buffer 100% D2O 125 6.5 ambient 300 5 2D TOCSY 2mM Cytochrome c; 25mM phosphate buffer 100% D2O 125 6.5 ambient 300 6 3D_15N-separated_NOESY 2mM Cytochrome c U-15N; 25mM phosphate buffer 90% H2O/10% D2O 125 6.5 ambient 300 7 3D_15N-separated_NOESY 2mM Cytochrome c U-15N; 25mM phosphate buffer 100% D2O 125 6.5 ambient 300 8 HNCBCA, CBCA(CO)NH, HBHA(CBCA)NH, HBHA(CBCACO)NH, HNHA 2mM Cytochrome c U-15N, 13C; 25mM phosphate buffer 90% H2O/10% D2O 125 6.5 ambient 300 9 3D_13C-separated_NOESY 2mM Cytochrome c U-15N, 13C; 25mM phosphate buffer 100% D2O 125 6.5 ambient 300
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software Hybrid distance geometry-dynamical simulated annealing method The structures are based on a total of 1562 restraints, 1449 are NOE-derived distance constraints, 80 dihedral angle restraints,33 distance restraints from hydrogen bonds. X-PLOR
NMR Ensemble Information Conformer Selection Criteria structures with acceptable covalent geometry Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 refinement X-PLOR 3.85 Brunger 2 data analysis AURELIA 2.5.9 Neidig 3 processing XwinNMR 2.6 Bruker