1I5J
NMR STRUCTURE OF HUMAN APOLIPOPROTEIN C-II IN THE PRESENCE OF SDS
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 1.8 mM U-15N ApoC-II; 220 mM SDS; 20 mM sodium acetate, pH5 | 90% H2O/10% D2O | 20 mM sodium acetate, 220 mM sodium dodecy sulfate | 5.0 | ambient | 313 | |
2 | HNHA | 1.8 mM U-15N ApoC-II; 220 mM SDS; 20 mM sodium acetate, pH5 | 90% H2O/10% D2O | 20 mM sodium acetate, 220 mM sodium dodecy sulfate | 5.0 | ambient | 313 | |
3 | HMQC-NOESY-HSQC | 1.8 mM U-15N ApoC-II; 220 mM SDS; 20 mM sodium acetate, pH5 | 90% H2O/10% D2O | 20 mM sodium acetate, 220 mM sodium dodecy sulfate | 5.0 | ambient | 313 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle and Cartesian dynamics | NMRPipe |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | Structures with favourable non-bond energy and minimal constraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 25 |
Representative Model | 5 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data analysis | NMRPipe | 1.7 | Delaglio |
2 | processing | XEASY | 1.4 | Bartels |
3 | processing | DYANA | 1.5 | guentert |
4 | refinement | CNS | 0.9 | Brunger |