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CRYSTAL STRUCTURE OF RHODOFERAX FERMENTANS HIGH POTENTIAL IRON-SULFUR PROTEIN REFINED TO 1.45 A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 290 HiPIP (20mg/ml, 20mM Tris pH 8, 2mM Beta-mercaptoethanol, 3.2M (NH4)2SO4 in 100mM Tris buffer, VAPOR DIFFUSION, HANGING DROP, temperature 290K
Crystal Properties Matthews coefficient Solvent content 2.11 41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.312 α = 90 b = 88.312 β = 90 c = 61.34 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH mirrors 1997-04-23 M SINGLE WAVELENGTH 2 1 x-ray 100 IMAGE PLATE MARRESEARCH mirrors 1997-06-09 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B 1.105 EMBL/DESY, HAMBURG BW7B 2 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7A 1.738, 1.742, 0.995 EMBL/DESY, HAMBURG BW7A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.45 22.09 99 0.047 6.9 5.6 42975 42975 17.254
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.45 1.53 95.4 0.412 0.6 3.8 5912
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD FREE R-VALUE 1.45 22 42733 42733 2151 99.6 0.186 0.186 0.187 0.1719 0.218 0.1891 random
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 15.8 p_staggered_tor 13.9 p_plane_restr 8.4 p_planar_tor 8.4 p_scangle_it 2.079 p_mcangle_it 1.908 p_scbond_it 1.508 p_mcbond_it 1.311 p_multtor_nbd 0.259 p_singtor_nbd 0.157
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 15.8 p_staggered_tor 13.9 p_plane_restr 8.4 p_planar_tor 8.4 p_scangle_it 2.079 p_mcangle_it 1.908 p_scbond_it 1.508 p_mcbond_it 1.311 p_multtor_nbd 0.259 p_singtor_nbd 0.157 p_xyhbond_nbd 0.124 p_chiral_restr 0.098 p_planar_d 0.068 p_angle_d 0.026 p_bond_d 0.008 p_xhyhbond_nbd p_hb_or_metal_coord p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1688 Nucleic Acid Atoms Solvent Atoms 281 Heterogen Atoms 54
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling SHARP phasing REFMAC refinement CCP4 data scaling