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 1HHX | pdb_00001hhx

Solution structure of LNA3:RNA hybrid


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1NOESY0.7E-3M LNA1:RNA, 0.1M NACL, 5E-5M EDTA AND 1E-2M PHOSPHATE BUFFER IN 100% D2O0.17.01 atm298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA750
NMR Refinement
MethodDetailsSoftware
simulated annealingA TOTAL OF 423 NOE DISTANCE RESTRAINTS WERE OBTAINED FROM A FULL RELAXATION MATRIX ANALYSIS WITH THE PROGRAM RANDMARDI. A FURTHER 58 NOE DISTANCE RESTRAINTS WERE OBTAINED FROM NOESY IN H2O USING ISPA. 22 WATSON-CRICK BASE PAIRING RESTRAINTS.Amber
NMR Ensemble Information
Conformer Selection CriteriaLOWEST ENERGY
Conformers Calculated Total Number40
Conformers Submitted Total Number34
Representative Model11 (n/a)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmberCASE, DA, KOLLMAN, PA
2structure solutionMARDIGRAS
3structure solutionAmber
4structure solutionFelix