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STRUCTURE OF THE CHROMODOMAIN FROM MOUSE HP1beta IN COMPLEX WITH THE LYSINE 9-METHYL HISTONE H3 N-TERMINAL PEPTIDE, NMR, 25 STRUCTURES
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
2D
150 mM NACL, 20 mM PHOSPHATE BUFFER, 10% D2O
5.5
1 atm
298
2
3D 1H
150 mM NACL, 20 mM PHOSPHATE BUFFER, 10% D2O
5.5
1 atm
298
3
15N
150 mM NACL, 20 mM PHOSPHATE BUFFER, 10% D2O
5.5
1 atm
298
4
13C
150 mM NACL, 20 mM PHOSPHATE BUFFER, 10% D2O
5.5
1 atm
298
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
DRX
600
2
Bruker
DRX
800
NMR Refinement
Method
Details
Software
simulated annealing
ARIA
NMR Ensemble Information
Conformer Selection Criteria
LOWEST ENERGY OF 75 CONVERGED STRUCTURES
Conformers Calculated Total Number
100
Conformers Submitted Total Number
25
Representative Model
1 (n/a)
Additional NMR Experimental Information
Details
THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE 2D AND 3D NMR SPECTROSCOPY ON 13C, 15N-LABELED PROTEIN. FOR PROTEIN ASSIGMENTS THE SAMPLE CONTAINED AN EXCESS OF 1.2 FOLD OF UNLABELLED PEPTIDE. THE PEPTIDE WAS ASSIGNED USING 13C, 15N REJECTED NOESY AND TOCSY EXPERIMENTS ON A SAMPLE OF EXCESS 13C, 15N LABELLED PROTEIN TO UNLABELLED PEPTIDE. THE METHYL GROUP RESONANCES OF LYSINE 4 AND 9 OF THE PEPTIDE WERE CONFIRMED WITH THE HELP OF A 13C METHYL-SELECTIVELY LABELLED SAMPLE MIXED WITH UNLABELLED PROTEIN. INTERMOLECULAR CONTACTS WERE OBTAINED FROM A 13C/15N X-FILTERED NOESY SPECTRUM AND A 3D J(CH,NH)- SEPARATED NOESY SPECTRUM