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PROCLAVAMINATE AMIDINO HYDROLASE FROM STREPTOMYCES CLAVULIGERUS
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1GQ6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 24% PEG 400, 100 MM HEPES PH7.5, pH 7.50
Crystal Properties Matthews coefficient Solvent content 2.28 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 94.922 α = 90 b = 81.348 β = 99.55 c = 120.389 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH OSMIC MIRRORS 2001-09-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.45 35.58 98.5 0.089 7.1 4 65708 31
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.45 2.58 92.6 0.321 2.3 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1GQ6 2.45 35.59 65691 3296 98.5 0.222 0.222 0.2212 0.236 0.2344 RANDOM 32.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -9.02 -6.3 0.43 8.59
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 23.8 c_scangle_it 2.21 c_mcangle_it 1.7 c_scbond_it 1.52 c_angle_deg 1.4 c_mcbond_it 1.04 c_improper_angle_d 0.97 c_bond_d 0.008 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 23.8 c_scangle_it 2.21 c_mcangle_it 1.7 c_scbond_it 1.52 c_angle_deg 1.4 c_mcbond_it 1.04 c_improper_angle_d 0.97 c_bond_d 0.008 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13113 Nucleic Acid Atoms Solvent Atoms 332 Heterogen Atoms 12
Software Software Software Name Purpose CNS refinement MOSFLM data reduction SCALA data scaling CNS phasing