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Structure of RecG bound to three-way DNA junction
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5 pH 5.00
Crystal Properties Matthews coefficient Solvent content 3.54 65.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 133.704 α = 90 b = 144.602 β = 113.82 c = 84.023 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.25 20 98.3 0.039 2.2 22945
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 3.24 20 21822 1191 99.3 0.275 0.272 0.2707 0.328 0.2804 RANDOM 94.26
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.86 4.7 1.84 -3.9
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 30.826 r_scangle_it 24.785 r_scbond_it 17.804 r_mcangle_it 16.211 r_mcbond_it 10.149 r_dihedral_angle_1_deg 9.181 r_angle_refined_deg 2.607 r_symmetry_vdw_refined 0.912 r_symmetry_hbond_refined 0.574 r_nbd_refined 0.516
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 30.826 r_scangle_it 24.785 r_scbond_it 17.804 r_mcangle_it 16.211 r_mcbond_it 10.149 r_dihedral_angle_1_deg 9.181 r_angle_refined_deg 2.607 r_symmetry_vdw_refined 0.912 r_symmetry_hbond_refined 0.574 r_nbd_refined 0.516 r_xyhbond_nbd_refined 0.365 r_chiral_restr 0.141 r_bond_refined_d 0.02 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5919 Nucleic Acid Atoms 832 Solvent Atoms Heterogen Atoms 28
Software Software Software Name Purpose REFMAC refinement