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ESCHERICHIA COLI GLYCEROL KINASE MUTANT WITH BOUND ATP ANALOG SHOWING SUBSTANTIAL DOMAIN MOTION
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1GLA PDB ENTRY 1GLA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 pH 6.5
Crystal Properties Matthews coefficient Solvent content 2.6 52.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 99.668 α = 90 b = 200.699 β = 90 c = 114.733 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 AREA DETECTOR XUONG-HAMLIN MULTIWIRE COLLIMATOR 1997-01-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 20 95 0.071 3.3 21230 32.2
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1GLA 3 20 21203 21203 95 0.166 0.166 0.1594
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation t_dihedral_angle_d 21.81 t_it 3.37 t_angle_deg 2.929 t_bond_d 0.02 t_gen_planes 0.015 t_trig_c_planes 0.014 t_nbd 0.013 t_incorr_chiral_ct t_pseud_angle
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7820 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 75
Software Software Software Name Purpose X-PLOR model building TNT refinement X-PLOR refinement SDMS data reduction SDMS data scaling X-PLOR phasing