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STRUCTURE OF RESTRICTION ENDONUCLEASE FOKI BOUND TO DNA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6 pH 6.00
Crystal Properties Matthews coefficient Solvent content 3.51 62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.59 α = 90 b = 119.34 β = 101.42 c = 71.52 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 130 CCD SOL GRUNER, FUJI MIRRORS 1994-05-03 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE F1 CHESS F1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 100 98.5 0.075 7.7 26253 2 57.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.8 2.9 96.1 0.325 2.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIRAS THROUGHOUT 2.8 8 2 24931 710 97.9 0.214 0.214 0.296 RANDOM 38.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.76 2.07 -1.09 -0.67
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 22.8 x_scangle_it 8.36 x_scbond_it 5.65 x_mcangle_it 5.63 x_mcbond_it 3.49 x_angle_deg 1.7 x_improper_angle_d 1.57 x_bond_d 0.011 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 22.8 x_scangle_it 8.36 x_scbond_it 5.65 x_mcangle_it 5.63 x_mcbond_it 3.49 x_angle_deg 1.7 x_improper_angle_d 1.57 x_bond_d 0.011 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4541 Nucleic Acid Atoms 814 Solvent Atoms 172 Heterogen Atoms
Software Software Software Name Purpose PHASES phasing CCP4 model building SOLOMON phasing X-PLOR model building X-PLOR refinement DENZO data reduction SCALEPACK data scaling CCP4 phasing X-PLOR phasing