☰ Navigation Tabs
CRYSTAL STRUCTURE OF E.COLI YBHB PROTEIN, A NEW MEMBER OF THE MAMMALIAN PEBP FAMILY
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 298 Sodium citrate, Hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 4.3 71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 85.47 α = 90 b = 85.47 β = 90 c = 73.3 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2000-06-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM30A ESRF BM30A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.66 25 96.2 0.057 0.045 13.6 4.7 165834 165834 20.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.66 1.75 76.3 0.57 0.44 1.7 4 4024
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD FREE-R 1.66 25 36545 31740 3522 96.2 0.17978 0.19681 RANDOM 22.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 28.2 p_staggered_tor 11.4 p_planar_tor 10.1 p_scangle_it 2.729 p_scbond_it 1.833 p_mcangle_it 1.555 p_mcbond_it 1.023 p_multtor_nbd 0.231 p_singtor_nbd 0.171 p_chiral_restr 0.13
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 28.2 p_staggered_tor 11.4 p_planar_tor 10.1 p_scangle_it 2.729 p_scbond_it 1.833 p_mcangle_it 1.555 p_mcbond_it 1.023 p_multtor_nbd 0.231 p_singtor_nbd 0.171 p_chiral_restr 0.13 p_xyhbond_nbd 0.088 p_planar_d 0.044 p_angle_d 0.026 p_plane_restr 0.0213 p_bond_d 0.009 p_xhyhbond_nbd p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1214 Nucleic Acid Atoms Solvent Atoms 204 Heterogen Atoms 15
Software Software Software Name Purpose SOLVE phasing REFMAC refinement DENZO data reduction CCP4 data scaling