1FIK

HUMAN PLATELET PROFILIN I CRYSTALLIZED IN LOW SALT


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
15.8CRYSTALLIZED FROM 30% PEG 8000 SOLUTION., pH 5.8
Crystal Properties
Matthews coefficientSolvent content
2.0959

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 74.687α = 90
b = 31.868β = 123.09
c = 62.425γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray290AREA DETECTORSIEMENS-NICOLET X1001993-12-21M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RUH2R

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.328.492.60.05419.81.352432

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMIR2.382409689.10.175
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor35.2
p_staggered_tor17
p_scangle_it3.077
p_angle_deg2.19
p_mcangle_it2.129
p_scbond_it1.915
p_planar_tor1.3
p_mcbond_it1.2
p_xyhbond_nbd0.209
p_multtor_nbd0.201
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor35.2
p_staggered_tor17
p_scangle_it3.077
p_angle_deg2.19
p_mcangle_it2.129
p_scbond_it1.915
p_planar_tor1.3
p_mcbond_it1.2
p_xyhbond_nbd0.209
p_multtor_nbd0.201
p_singtor_nbd0.197
p_chiral_restr0.129
p_planar_d0.035
p_angle_d0.027
p_bond_d0.013
p_plane_restr0.01
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1046
Nucleic Acid Atoms
Solvent Atoms45
Heterogen Atoms5

Software

Software
Software NamePurpose
PHASESphasing
X-PLORmodel building
PROFFTrefinement
X-PLORrefinement
XDSdata reduction
XSCALEdata scaling
X-PLORphasing