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STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1 MM ALCR U-15N, 1.1 MM DOUBLE STRANDED DNA 90% H2O/10% D2O 5.9 1 atm 293 2 3D_15N-separated_NOESY 1 MM ALCR U-15N, 1.1 MM DOUBLE STRANDED DNA 90% H2O/10% D2O 5.9 1 atm 293 3 HNHA 1 MM ALCR U-15N, 1.1 MM DOUBLE STRANDED DNA 90% H2O/10% D2O 5.9 1 atm 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DMX 600 2 Bruker DRX 800
NMR Refinement Method Details Software distance geometry
simulated annealing 1142 NOE-DERIVED CONSTRAINTS, 76 H-BOND CONSTRAINTS, 33 PHI ANGLE
RESTRAINTS, 118 LOOSE ANGLE RESTRAINTS ON THE DNA BACKBONE XwinNMR
NMR Ensemble Information Conformer Selection Criteria Conformers Calculated Total Number Conformers Submitted Total Number 1 Representative Model 1 (minimized average structure)
Computation: NMR Software # Classification Version Software Name Author 1 processing XwinNMR 2.1 2 data analysis Gifa 4 Delsuc, M.A. 3 structure solution DIANA Gunthert 4 refinement X-PLOR 3.1 Brunger