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ILEAL LIPID BINDING PROTEIN IN COMPLEX WITH GLYCOCHOLATE
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 3-4mM ILBP/glycocholate complex 20mM phosphate; 0.05% azide; 90% H2O, 10% D2O 20mM KH2PO4 5.0 ambient 310 2 2D 1H/13C-NOESY 3-4mM ILBP/glycocholate complex 20mM phosphate; 0.05% azide; 90% H2O, 10% D2O 20mM KH2PO4 5.0 ambient 310 3 2D TOCSY 3-4mM ILBP/glycocholate complex 20mM phosphate; 0.05% azide; 90% H2O, 10% D2O 20mM KH2PO4 5.0 ambient 310
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DMX 500 2 Bruker DMX 600 3 Bruker DRX 800
NMR Refinement Method Details Software distance geometry and simulated annealing the ligand was docked into the protein structure by simulated annealing XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energies after docking of ligand Conformers Calculated Total Number 8 Conformers Submitted Total Number 5 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 1.3 Bruker 2 data analysis AURELIA 2.1 Bruker 3 data analysis Felix 95.0 MSI 4 structure solution DIANA 2.8 Guenthert 5 refinement SYBYL 6.4 Tripos