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NMR SOLUTION STRUCTURE OF THE 5S RRNA E-LOOP/L25 COMPLEX
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-SEPARATED_NOESY 2MM L25 U-15N,13C/5SE NA; 20MM PHOSPHATE BUFFER; 100MM KCL 100mM KCL 7.2 AMBIENT 298 2 3D_15N-SEPARATED_NOESY 2MM L25 U-15N,13C/5SE NA; 20MM PHOSPHATE BUFFER; 100MM KCL 100mM KCL 7.2 AMBIENT 298 3 3D_F1-13C-FILTERED,F3-EDITED_NOESY 2.2MM L25 U-15N,13C/5SE NA; 20MM PHOSPHATE BUFFER; 100MM KCL 100mM KCL 7.2 AMBIENT 298 4 3D_13C-SEPARATED_NOESY 1.8MM L25 NA/5SE U-15N,13C; 20MM PHOSPHATE BUFFER; 100MM KCL 100mM KCL 7.2 AMBIENT 298 5 3D_15N-SEPARATED_NOESY 1.8MM L25 NA/5SE U-15N; 20MM PHOSPHATE BUFFER; 100MM KCL 100mM KCL 7.2 AMBIENT 298 6 2D NOESY 1.8MM L25 NA/5SE U-15N; 20MM PHOSPHATE BUFFER; 100MM KCL 100mM KCL 7.2 AMBIENT 298 7 2D_CPMG_NOESY 1.8MM L25 NA/5SE U-15N; 20MM PHOSPHATE BUFFER; 100MM KCL 100mM KCL 7.2 AMBIENT 298 8 3D_F1-13C-FILTERED,F3-EDITED_NOESY 1.7MM L25 NA/5SE U-15N,13C; 20MM PHOSPHATE BUFFER; 100MM KCL 100mM KCL 7.2 AMBIENT 298 9 3D_F1-13C/15N-FILTERED,F3-EDITED_NOESY 2MM L25 U-15N,13C/5SE NA; 20MM PHOSPHATE BUFFER; 100MM KCL 100mM KCL 7.2 AMBIENT 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 750
NMR Refinement Method Details Software HYBRID DISTANCE GEOMETRY/SIMULATED ANNEALING VNMR
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 2 (closest to the average)
Additional NMR Experimental Information Details THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY.
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR 5.3B 2 data analysis XEASY 1.3.9 BARTELS 3 structure solution DYANA 1.5 GUENTERT 4 refinement OPAL/AMBER94 2.6 LUGINBUEHL/CORNELL