☰ Navigation Tabs
COMPLEX BETWEEN A COVALENT INTERMEDIATE AND BACILLUS CIRCULANS STRAIN 251 CGTASE E257Q
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1CXI
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.1 CRYSTAL SOAKED FIRST IN 4-DEOXY MALTOSE,THEN IN 4-DEOXY MALTOTRIOSYL ALPHA-
FLUORIDE, pH 6.10
Crystal Properties Matthews coefficient Solvent content 2.73 55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 117.071 α = 90 b = 109.281 β = 90 c = 65.335 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 1997-07-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B EMBL/DESY, HAMBURG BW7B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.81 58.54 94.9 0.053 13.1 3.5 73264 4 17.51
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.83 49.9 0.279 3 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT RFREE 1CXI 1.81 8 72330 3617 94 0.155 0.1526 0.19 EVERY
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation t_dihedral_angle_d 16.12 t_it 1.574 t_angle_deg 1.508 t_nbd 0.012 t_gen_planes 0.011 t_bond_d 0.006 t_trig_c_planes 0.006 t_incorr_chiral_ct t_pseud_angle
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5264 Nucleic Acid Atoms Solvent Atoms 677 Heterogen Atoms 122
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling TNT refinement TNT phasing