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RECOMBINANT SPERM WHALE MYOGLOBIN L104A MUTANT (MET)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1MBW PDB ENTRY 1MBW
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 9 2.6-3.0 M AMMONIUM SULFATE, 20 MM TRIS, 1 MM EDTA, PH 9.0
Crystal Properties Matthews coefficient Solvent content 3.09 61.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.54 α = 90 b = 91.54 β = 90 c = 45.886 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 295 IMAGE PLATE RIGAKU RAXIS IIC 1997-11-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE SIEMENS
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 50 93 0.052 19086
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER FREE R PDB ENTRY 1MBW 1.8 5 16297 1810 83.5 0.1659 0.1685 0.1824 0.2149 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 1422.3
RMS Deviations Key Refinement Restraint Deviation s_similar_adp_cmpnt 0.079 s_zero_chiral_vol 0.047 s_non_zero_chiral_vol 0.045 s_anti_bump_dis_restr 0.036 s_angle_d 0.025 s_bond_d 0.009 s_similar_dist 0.005 s_from_restr_planes s_rigid_bond_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1222 Nucleic Acid Atoms Solvent Atoms 115 Heterogen Atoms 49
Software Software Software Name Purpose XDS data scaling XSCALE data scaling X-PLOR model building SHELXL-97 model building SHELXL-97 refinement XDS data reduction X-PLOR phasing SHELXL-97 phasing