☰ Navigation Tabs
Recombinant sperm whale myoglobin L89G mutatnt (MET)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1MBW PDB ENTRY 1MBW
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 9 2.6 - 3.0 M (NH4)2SO4, 20 MM TRIS, 1 MM EDTA, PH 9.0
Crystal Properties Matthews coefficient Solvent content 3.21 61.64
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.456 α = 90 b = 91.456 β = 90 c = 45.984 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 295 IMAGE PLATE RIGAKU RAXIS IIC 1997-07-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE SIEMENS
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 96.6 0.079 26102 26102
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER FREE R PDB ENTRY 1MBW 1.9 5 14378 14378 1597 87.3 0.163 0.1626 0.163 0.2136 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 1383.6
RMS Deviations Key Refinement Restraint Deviation s_anti_bump_dis_restr 0.089 s_similar_adp_cmpnt 0.077 s_non_zero_chiral_vol 0.049 s_zero_chiral_vol 0.044 s_angle_d 0.023 s_bond_d 0.01 s_similar_dist 0.006 s_from_restr_planes s_rigid_bond_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1221 Nucleic Acid Atoms Solvent Atoms 186 Heterogen Atoms 49
Software Software Software Name Purpose XDS data scaling XSCALE data scaling SHELXS phasing SHELXL-97 refinement XDS data reduction