☰ Navigation Tabs
DEOXY RHB1.2 (RECOMBINANT HEMOGLOBIN)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1ABY
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 PERUTZ, J.CRYST.GROWTH 2(1968)54-56, pH 6.5
Crystal Properties Matthews coefficient Solvent content 1.84 33.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.144 α = 90 b = 83.282 β = 99.07 c = 53.928 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 295 IMAGE PLATE RIGAKU RAXIS IIC COLLIMATOR 1998-12-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE SIEMENS
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 30 90.2 0.065 11.3 2.91 45959
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.9 87.4 0.241 4.42 2.86
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R 1ABY 1.8 8 45496 2156 90.2 0.189 0.1879 0.166 0.2397 0.1764 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 4802
RMS Deviations Key Refinement Restraint Deviation s_anti_bump_dis_restr 0.07 s_non_zero_chiral_vol 0.038 s_zero_chiral_vol 0.034 s_similar_dist 0.02 s_angle_d 0.015 s_bond_d 0.011 s_from_restr_planes s_rigid_bond_adp_cmpnt s_similar_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4396 Nucleic Acid Atoms Solvent Atoms 244 Heterogen Atoms 172
Software Software Software Name Purpose XDS data scaling XSCALE data scaling SHELX model building SHELXL-97 refinement XDS data reduction SHELX phasing