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DEOXY RHB1.0 (RECOMBINANT HEMOGLOBIN)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1ABY
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 PERUTZ, J.CRYST.GROWTH 2(1968)54-56, pH 6.5
Crystal Properties Matthews coefficient Solvent content 1.85 33.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.132 α = 90 b = 83.579 β = 99.25 c = 53.991 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 295 IMAGE PLATE RIGAKU RAXIS IIC COLLIMATOR 1998-08-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE SIEMENS
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 30 92 0.061 22.1 2.52 47219
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.9 93.7 0.237 6.24 2.22
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R 1ABY 1.803 8 46518 46518 2264 90.7 0.1892 0.1876 0.2341 0.1628 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 2 4921
RMS Deviations Key Refinement Restraint Deviation s_non_zero_chiral_vol 0.042 s_zero_chiral_vol 0.038 s_similar_dist 0.023 s_angle_d 0.015 s_anti_bump_dis_restr 0.006 s_bond_d 0.005 s_from_restr_planes s_rigid_bond_adp_cmpnt s_similar_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4394 Nucleic Acid Atoms Solvent Atoms 373 Heterogen Atoms 172
Software Software Software Name Purpose SHELXL-97 refinement XSCALE data scaling CNS refinement XDS data scaling XDS data reduction CNS phasing