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MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH EGFR INTERNALIZATION PEPTIDE FYRALM
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.1 HANGING DROP, 2.2M NACL, 0.4M NA/K PHOSPHATE, 10MM DTT 0.1M MES PH 7.1, 15% GLYCEROL, 16DEGREES, MOLAR RATIO OF PEPTIDE TO PROTEIN 3:1, vapor diffusion - hanging drop
Crystal Properties Matthews coefficient Solvent content 4.45 72.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 125.68 α = 90 b = 125.68 β = 90 c = 73.16 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 105 IMAGE PLATE MAR scanner 300 mm plate MIRROR 1998-05-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX7.2 SRS PX7.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.65 35 99 0.094 0.094 21.3 9.2 119506 4 82
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.65 2.79 97 0.882 0.882 2.1 8.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 2.65 35 19296 842 99.6 0.272 0.25 0.2283 0.296 0.2721 RANDOM 60
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.25 0.63 1.25 1.111
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 22.5 p_staggered_tor 18.6 p_scangle_it 4.8 p_scbond_it 3.4 p_mcangle_it 2.8 p_planar_tor 1.7 p_mcbond_it 1.6 p_multtor_nbd 0.25 p_singtor_nbd 0.198 p_xyhbond_nbd 0.185
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 22.5 p_staggered_tor 18.6 p_scangle_it 4.8 p_scbond_it 3.4 p_mcangle_it 2.8 p_planar_tor 1.7 p_mcbond_it 1.6 p_multtor_nbd 0.25 p_singtor_nbd 0.198 p_xyhbond_nbd 0.185 p_chiral_restr 0.119 p_angle_d 0.038 p_planar_d 0.035 p_bond_d 0.01 p_plane_restr 0.0026 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2092 Nucleic Acid Atoms Solvent Atoms 51 Heterogen Atoms
Software Software Software Name Purpose SHARP phasing SOLOMON phasing REFMAC refinement MOSFLM data reduction CCP4 data scaling