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P.SHERMANII SOD(FE+3) 140K PH8
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1AR5 FE SOD, PDB ENTRY 1AR5
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.1 pH 8.1
Crystal Properties Matthews coefficient Solvent content 1.97 32
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.181 α = 90 b = 84.319 β = 90 c = 107.035 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 140 AREA DETECTOR SIEMENS 1998-05-19 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.35 42.16 92 0.083 6.7 6.5 72107 2 10.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.35 1.39 80.9 0.17 4.1 2.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT FE SOD, PDB ENTRY 1AR5 1.35 9 3 66460 3369 84.8 0.205 0.205 0.236 RANDOM 11.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 20.9 x_scangle_it 3.073 x_scbond_it 2.149 x_mcangle_it 1.71 x_angle_deg 1.35 x_mcbond_it 1.135 x_improper_angle_d 0.95 x_bond_d 0.005 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 20.9 x_scangle_it 3.073 x_scbond_it 2.149 x_mcangle_it 1.71 x_angle_deg 1.35 x_mcbond_it 1.135 x_improper_angle_d 0.95 x_bond_d 0.005 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3208 Nucleic Acid Atoms Solvent Atoms 651 Heterogen Atoms 2
Software Software Software Name Purpose X-PLOR model building X-PLOR refinement SAINT data reduction SAINT data scaling X-PLOR phasing