☰ Navigation Tabs
N39S MUTANT OF RNASE SA FROM STREPTOMYCES AUREOFACIENS
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1RGG PDB ENTRY 1RGG
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 HANGING DROP VAPOUR EQUILIBRATION DROP: 10 MG/ML OF PROTEIN 0.1 M TRIS-HCL
BUFFER AT PH 8.0 12,5 % PEG 6000 RESERVOIR: 25 % PEG 6000
Crystal Properties Matthews coefficient Solvent content 2.37 48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 41.49 α = 90 b = 46.65 β = 90 c = 51.65 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE MARRESEARCH MSC "LONG" MIRRORS 1997-07-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 14.9 92.1 0.058 30.1 4.8 12724 25
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.6 1.63 57.1 0.471 1.9 2.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1RGG 1.6 14.9 12724 895 92.1 0.176 0.181 0.218 RANDOM 26.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_staggered_tor 16.6 p_planar_tor 6.1 p_scangle_it 5.93 p_scbond_it 4.426 p_mcangle_it 3.967 p_mcbond_it 2.885 p_multtor_nbd 0.285 p_chiral_restr 0.22 p_singtor_nbd 0.171 p_planar_d 0.042
RMS Deviations Key Refinement Restraint Deviation p_staggered_tor 16.6 p_planar_tor 6.1 p_scangle_it 5.93 p_scbond_it 4.426 p_mcangle_it 3.967 p_mcbond_it 2.885 p_multtor_nbd 0.285 p_chiral_restr 0.22 p_singtor_nbd 0.171 p_planar_d 0.042 p_angle_d 0.04 p_plane_restr 0.0351 p_bond_d 0.023 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_xyhbond_nbd p_orthonormal_tor p_transverse_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 735 Nucleic Acid Atoms Solvent Atoms 95 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction AMoRE phasing REFMAC refinement