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SECOND CALPONIN HOMOLOGY DOMAIN FROM UTROPHIN
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1AA2 PDB 1AA2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.6 pH 7.6
Crystal Properties Matthews coefficient Solvent content 2.2 44.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.92 α = 90 b = 32.21 β = 116.25 c = 65.36 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 1997-08-25 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.5 SRS PX9.5
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 22 99.5 0.032 10.8 2.8 14514 23.85
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.99 2.1 98.9 0.125 5.9 2.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB 1AA2 2 20 15622 776 99.5 0.202 0.185 0.1697 0.257 0.2429 RANDOM 31.23
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.043 -5.93 5.554 -3.65
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 23.1 p_staggered_tor 17.7 p_scangle_it 8.05 p_scbond_it 6.19 p_planar_tor 4.3 p_mcangle_it 4.232 p_mcbond_it 3.167 p_multtor_nbd 0.263 p_singtor_nbd 0.188 p_chiral_restr 0.138
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 23.1 p_staggered_tor 17.7 p_scangle_it 8.05 p_scbond_it 6.19 p_planar_tor 4.3 p_mcangle_it 4.232 p_mcbond_it 3.167 p_multtor_nbd 0.263 p_singtor_nbd 0.188 p_chiral_restr 0.138 p_planar_d 0.041 p_angle_d 0.036 p_plane_restr 0.0231 p_bond_d 0.015 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_xyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1771 Nucleic Acid Atoms Solvent Atoms 173 Heterogen Atoms
Software Software Software Name Purpose AMoRE phasing REFMAC refinement MOSFLM data reduction CCP4 data scaling