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SUBTILISIN DY IN COMPLEX WITH THE SYNTHETIC INHIBITOR N-BENZYLOXYCARBONYL-ALA-PRO-PHE-CHLOROMETHYL KETONE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1CSE PDB ENTRY 1CSE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6 AS GIVEN IN REFERENCE 1, pH 6.0
Crystal Properties Matthews coefficient Solvent content 2.1 41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 52.83 α = 90 b = 72.75 β = 90 c = 59.89 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 278 IMAGE PLATE MARRESEARCH 1993-02-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 EMBL/DESY, HAMBURG X11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 10 96.7 0.03 0.03 23 4.4 22887
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.75 1.79 92.2 0.052 0.052 14 3.1
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1CSE 1.75 10 22887 96.7 0.14 0.1354
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 18.4 p_staggered_tor 13.6 p_scangle_it 4.9 p_planar_tor 3.6 p_scbond_it 3.3 p_mcangle_it 2.9 p_mcbond_it 2.2 p_multtor_nbd 0.29 p_singtor_nbd 0.12 p_planar_d 0.048
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 18.4 p_staggered_tor 13.6 p_scangle_it 4.9 p_planar_tor 3.6 p_scbond_it 3.3 p_mcangle_it 2.9 p_mcbond_it 2.2 p_multtor_nbd 0.29 p_singtor_nbd 0.12 p_planar_d 0.048 p_angle_d 0.041 p_bond_d 0.022 p_plane_restr 0.019 p_chiral_restr 0.018 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_xyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1948 Nucleic Acid Atoms Solvent Atoms 226 Heterogen Atoms 36
Software Software Software Name Purpose AMoRE phasing CCP4 refinement DENZO data reduction SCALEPACK data scaling