☰ Navigation Tabs
BIFUNCTIONAL HAGEMAN FACTOR/AMYLASE INHIBITOR FROM MAIZE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1BIP PDB ENTRY 1BIP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 PROTEIN WAS CRYSTALLIZED FROM 30% PEG-400, 100 MM HEPES PH 7.5, 0.2 M MGCL2. CRYSTAL WAS SOAKED IN 0.1 M SODIUM ACETATE, 30% PEG-400, 0.2 M MGCL2, PH 5.8 PRIOR TO DATA COLLECTION.
Crystal Properties Matthews coefficient Solvent content 2.41 49
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.12 α = 90 b = 57.12 β = 90 c = 80.24 γ = 90
Symmetry Space Group P 42 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE RIGAKU RAXIS IIC MIRRORS 1995-05-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 45 92 9031 2 19.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.94 1.97 65.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR/MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1BIP 1.95 45 2 9030 928 82 0.195 0.195 0.287 RANDOM 39.3
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 25.2 x_scangle_it 8.44 x_scbond_it 5.61 x_mcangle_it 4.94 x_mcbond_it 3.41 x_angle_deg 1.9 x_improper_angle_d 1.12 x_bond_d 0.016 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 25.2 x_scangle_it 8.44 x_scbond_it 5.61 x_mcangle_it 4.94 x_mcbond_it 3.41 x_angle_deg 1.9 x_improper_angle_d 1.12 x_bond_d 0.016 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1361 Nucleic Acid Atoms Solvent Atoms 96 Heterogen Atoms
Software Software Software Name Purpose PROCESS data collection PROCESS data reduction EPMR phasing X-PLOR model building X-PLOR refinement PROCESS data scaling X-PLOR phasing