☰ Navigation Tabs
BARNASE WILDTYPE STRUCTURE AT PH 7.5 FROM A CRYO_COOLED CRYSTAL AT 100K
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1BNJ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 DROP: 8-12 MG/ML PROTEIN 6 MM ZNSO4 0.6 M (NH4)2SO4 WELL: 2.58-2.73 M AMMONIUM PHOSPHATE BUFFER, PH 7.5 1-2 MM ZNSO4 0.15-0.30 M (NH4)2SO4 5-10 MM NH4OH
Crystal Properties Matthews coefficient Solvent content 2.09 41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.63 α = 90 b = 57.63 β = 90 c = 80.98 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH SUPER DOUBLE MIRRORS 1997-05-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ELLIOTT GX-13
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 10.8 96.9 0.058 12.62 1.9 27056 14.37
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.9 88 0.163 6.01 1.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 1BNJ 1.8 10.8 25666 96.9 0.173 0.1684 0.236 0.2282 16.9
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 18.2 p_staggered_tor 14.8 p_planar_tor 4.5 p_scangle_it 2.524 p_mcangle_it 2.134 p_scbond_it 1.797 p_mcbond_it 1.572 p_multtor_nbd 0.25 p_singtor_nbd 0.174 p_xyhbond_nbd 0.153
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 18.2 p_staggered_tor 14.8 p_planar_tor 4.5 p_scangle_it 2.524 p_mcangle_it 2.134 p_scbond_it 1.797 p_mcbond_it 1.572 p_multtor_nbd 0.25 p_singtor_nbd 0.174 p_xyhbond_nbd 0.153 p_chiral_restr 0.131 p_angle_d 0.031 p_planar_d 0.03 p_bond_d 0.013 p_angle_deg p_hb_or_metal_coord p_plane_restr p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2604 Nucleic Acid Atoms Solvent Atoms 380 Heterogen Atoms 1
Software Software Software Name Purpose iMOSFLM data reduction SCALA data scaling X-PLOR model building REFMAC refinement CCP4 data scaling X-PLOR phasing