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G61V FLAVODOXIN MUTANT FROM DESULFOVIBRIO VULGARIS
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other RECOMBINANT FLAVODOXIN
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 macroseeding 7 PROTEIN SEED CRYSTALS WERE OBTAINED FROM 60-70% AMMONIUM SULFATE, 10MM TRIS PH 7.0, 1-2% ACETONE. MACROSEEDS WERE TRANSFERRED TO THE ABOVE SOLUTION WITH NO ACETONE PRESENT., macroseeding
Crystal Properties Matthews coefficient Solvent content 2.6 53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 56.49 α = 90 b = 88.14 β = 90 c = 35.19 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 277 IMAGE PLATE MARRESEARCH MIRROR 1992-04-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.5 SRS PX9.5
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 20 89.2 0.062 0.062 10.2 3.4 12653 -3 18.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.9 79.9 0.49 0.49 1.6 3.4
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT RECOMBINANT FLAVODOXIN 1.8 10 61954 61954 89.3 0.175 24.5
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 24.8 p_staggered_tor 17.7 p_scangle_it 9.8 p_scbond_it 6.7 p_mcangle_it 4.2 p_mcbond_it 3.1 p_planar_tor 2.4 p_multtor_nbd 0.25 p_singtor_nbd 0.19 p_xyhbond_nbd 0.18
Show All KeysRMS Deviations Key Refinement Restraint Deviation p_transverse_tor 24.8 p_staggered_tor 17.7 p_scangle_it 9.8 p_scbond_it 6.7 p_mcangle_it 4.2 p_mcbond_it 3.1 p_planar_tor 2.4 p_multtor_nbd 0.25 p_singtor_nbd 0.19 p_xyhbond_nbd 0.18 p_chiral_restr 0.16 p_angle_d 0.046 p_planar_d 0.045 p_bond_d 0.016 p_plane_restr 0.014 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Hide All KeysNon-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1106 Nucleic Acid Atoms Solvent Atoms 126 Heterogen Atoms 31
Software Software Software Name Purpose MERLOT phasing CCP4 refinement DENZO data reduction SCALEPACK data scaling