X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 1CPNCIRCULARLY PERMUTED 1,3-1,4-ENDO-BETA-GLUCANASE CPMAC57 (PDB ENTRY 1CPN) AND BACILLUS CIRCULANS 1,3-ENDO-BETA-XYLANASE (PDB ENTRY 1BCX).
experimental modelPDB 1BCXCIRCULARLY PERMUTED 1,3-1,4-ENDO-BETA-GLUCANASE CPMAC57 (PDB ENTRY 1CPN) AND BACILLUS CIRCULANS 1,3-ENDO-BETA-XYLANASE (PDB ENTRY 1BCX).

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
18.5pH 8.5
Crystal Properties
Matthews coefficientSolvent content
2.646.4

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 45.27α = 90
b = 133.7β = 99.76
c = 77.95γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray123IMAGE PLATEMARRESEARCH1996-08-21M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM14ESRFBM14

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.12091.30.0580.05811.63.44849923.98
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.12.21800.230.233.33.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTCIRCULARLY PERMUTED 1,3-1,4-ENDO-BETA-GLUCANASE CPMAC57 (PDB ENTRY 1CPN) AND BACILLUS CIRCULANS 1,3-ENDO-BETA-XYLANASE (PDB ENTRY 1BCX).2.119.9648499244091.30.1770.1760.224RANDOM21.7
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.183.8062.1680.464
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor15.7
p_planar_tor4.6
p_scangle_it2.455
p_mcangle_it2.349
p_scbond_it1.665
p_mcbond_it1.584
p_chiral_restr0.133
p_angle_d0.031
p_planar_d0.031
p_bond_d0.012
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor15.7
p_planar_tor4.6
p_scangle_it2.455
p_mcangle_it2.349
p_scbond_it1.665
p_mcbond_it1.584
p_chiral_restr0.133
p_angle_d0.031
p_planar_d0.031
p_bond_d0.012
p_angle_deg
p_hb_or_metal_coord
p_plane_restr
p_singtor_nbd
p_multtor_nbd
p_xhyhbond_nbd
p_xyhbond_nbd
p_orthonormal_tor
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6219
Nucleic Acid Atoms
Solvent Atoms312
Heterogen Atoms2

Software

Software
Software NamePurpose
DENZOdata reduction
SCALAdata scaling
AMoREphasing
REFMACrefinement
CCP4data scaling