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PHOSPHOENOLPYRUVATE CARBOXYKINASE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1AYL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.4 pH 4.4
Crystal Properties Matthews coefficient Solvent content 2.38 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 126.19 α = 90 b = 96.61 β = 95.8 c = 46.86 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 300 DIFFRACTOMETER ENRAF-NONIUS FAST 1996-10-15 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ENRAF-NONIUS
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 60 90 0.118 4.3 2.6 39324 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 3 85 0.34 2.1 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE-R 1AYL 1.9 6 2 37529 1907 0.218 0.218 0.2128 0.26
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_angle_deg 1.32 x_bond_d 0.007 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d
RMS Deviations Key Refinement Restraint Deviation x_angle_deg 1.32 x_bond_d 0.007 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d x_improper_angle_d_na x_improper_angle_d_prot x_mcbond_it x_mcangle_it x_scbond_it x_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4114 Nucleic Acid Atoms Solvent Atoms 232 Heterogen Atoms 39
Software Software Software Name Purpose X-PLOR model building X-PLOR refinement MADNES data reduction CCP4 data scaling X-PLOR phasing