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THE STRUCTURE OF THE ORTHORHOMBIC FORM OF HEN EGG-WHITE LYSOZYME AT 1.5 ANGSTROMS RESOLUTION
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2LZH PDB ENTRY 2LZH
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.48 pH 4.48
Crystal Properties Matthews coefficient Solvent content 2.15 42.84
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59.062 α = 90 b = 68.451 β = 90 c = 30.517 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE RIGAKU RAXIS IIC 1995-11-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 15 91.1 0.044 11.7 3.1 20571 1
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 2LZH 1.5 10 1 16327 91.1 0.212 0.1977
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 18.9 p_staggered_tor 17.8 p_planar_tor 7.9 p_scangle_it 3.6 p_scbond_it 3.2 p_mcangle_it 2.9 p_mcbond_it 2.5 p_xyhbond_nbd 0.299 p_chiral_restr 0.212 p_singtor_nbd 0.183
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 18.9 p_staggered_tor 17.8 p_planar_tor 7.9 p_scangle_it 3.6 p_scbond_it 3.2 p_mcangle_it 2.9 p_mcbond_it 2.5 p_xyhbond_nbd 0.299 p_chiral_restr 0.212 p_singtor_nbd 0.183 p_multtor_nbd 0.159 p_plane_restr 0.033 p_planar_d 0.024 p_bond_d 0.009 p_angle_d 0.0034 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1001 Nucleic Acid Atoms Solvent Atoms 78 Heterogen Atoms
Software Software Software Name Purpose RIGAKU data collection bioteX data reduction X-PLOR model building GPRLSA refinement X-PLOR refinement RIGAKU data reduction bioteX data scaling X-PLOR phasing