1A6W

B1-8 FV FRAGMENT COMPLEXED WITH A (4-HYDROXY-5-IODO-3-NITROPHENYL) ACETATE COMPOUND


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1dialysisTHE PURIFIED PROTEIN HAS BEEN DIALYSED INTO A 10 MM TRIS-HCL PH 7.5 BUFFER ALSO CONTAINING 20 MM NACL. PEG 1550 WAS USED AS PRECIPITANT., dialysis
Crystal Properties
Matthews coefficientSolvent content
2.4340.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 72.27α = 90
b = 83.51β = 90
c = 40.23γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray269AREA DETECTORXENTRONICS1995-08-03M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.83695.10.0542.96549818.5
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.81.8579.20.3011.6

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENT26159820.17119.2
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor16.5
p_scangle_it2.3
p_planar_tor2.3
p_scbond_it1.5
p_mcangle_it1.4
p_mcbond_it0.9
p_chiral_restr0.113
p_angle_d0.041
p_bond_d0.013
p_plane_restr0.013
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor16.5
p_scangle_it2.3
p_planar_tor2.3
p_scbond_it1.5
p_mcangle_it1.4
p_mcbond_it0.9
p_chiral_restr0.113
p_angle_d0.041
p_bond_d0.013
p_plane_restr0.013
p_angle_deg
p_planar_d
p_hb_or_metal_coord
p_singtor_nbd
p_multtor_nbd
p_xhyhbond_nbd
p_xyhbond_nbd
p_orthonormal_tor
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1774
Nucleic Acid Atoms
Solvent Atoms182
Heterogen Atoms17

Software

Software
Software NamePurpose
MOSFLMdata reduction
AGROVATA/ROTAVATAdata reduction
MLPHAREphasing
PROLSQrefinement
AGROVATAdata scaling
ROTAVATAdata scaling