189D

HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION7pH 7.00, VAPOR DIFFUSION
Crystal Properties
Matthews coefficientSolvent content
2.2846.11

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.04α = 90
b = 42.04β = 90
c = 25.09γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray288DIFFRACTOMETERNICOLET
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION2.18213880.152
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
n_phos_angle_it2.745
n_sugar_angle_it2.542
n_phos_bond_it2.134
n_sugar_bond_it1.683
n_multtor_nbd0.138
n_singtor_nbd0.084
n_phos_bond_angle_d0.05
n_angle_d0.021
n_phos_bond_d0.018
n_chiral_restr0.009
RMS Deviations
KeyRefinement Restraint Deviation
n_phos_angle_it2.745
n_sugar_angle_it2.542
n_phos_bond_it2.134
n_sugar_bond_it1.683
n_multtor_nbd0.138
n_singtor_nbd0.084
n_phos_bond_angle_d0.05
n_angle_d0.021
n_phos_bond_d0.018
n_chiral_restr0.009
n_bond_d0.007
n_plane_restr0.007
n_planar_d
n_hb_or_metal_coord
n_bond_angle_restr
n_dihedral_angle_restr
n_impr_tor
n_sugar_bond_d
n_sugar_bond_angle_d
n_xhyhbond_nbd
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms
Nucleic Acid Atoms161
Solvent Atoms40
Heterogen Atoms

Software

Software
Software NamePurpose
NUCLSQrefinement