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Crystal Structure of FtsZ with Z1143279263
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-922 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.62 53.11
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.627 α = 90 b = 88.627 β = 90 c = 179.513 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-922 ftsz-922 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-922 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-922 1.957 43.022 100 0.197 0.205 0.056 0.998 10.7 13.3 57318
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-922 1.957 1.991 100 2.175 2.262 0.614 0.35 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.957 43.059 57304 2862 99.948 0.182 0.1807 0.1885 0.2156 0.2223 32.664
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.013 -0.006 -0.013 0.042
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.94 r_dihedral_angle_6_deg 14.301 r_lrange_it 8.695 r_lrange_other 8.638 r_dihedral_angle_2_deg 7.655 r_scangle_it 7.024 r_scangle_other 7.022 r_dihedral_angle_1_deg 6.797 r_scbond_it 4.601 r_scbond_other 4.598
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.94 r_dihedral_angle_6_deg 14.301 r_lrange_it 8.695 r_lrange_other 8.638 r_dihedral_angle_2_deg 7.655 r_scangle_it 7.024 r_scangle_other 7.022 r_dihedral_angle_1_deg 6.797 r_scbond_it 4.601 r_scbond_other 4.598 r_mcangle_it 4.352 r_mcangle_other 4.352 r_mcbond_it 2.921 r_mcbond_other 2.918 r_angle_refined_deg 1.745 r_angle_other_deg 0.651 r_symmetry_nbd_other 0.537 r_symmetry_xyhbond_nbd_refined 0.23 r_nbd_refined 0.219 r_symmetry_xyhbond_nbd_other 0.213 r_nbd_other 0.192 r_xyhbond_nbd_refined 0.188 r_nbtor_refined 0.171 r_symmetry_nbd_refined 0.145 r_symmetry_nbtor_other 0.114 r_chiral_restr 0.084 r_xyhbond_nbd_other 0.038 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 31
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction